CDS

Accession Number TCMCG017C32126
gbkey CDS
Protein Id OMO58071.1
Location complement(join(102334..102801,102977..103104,103309..103405,103536..103949,104715..104909,105165..105442,105594..105645,105736..105923,106325..106372,106470..106503,106586..106717,106934..107029,107390..107573,107722..107777,107914..108009,108434..108914,109187..109488))
GeneID InterPro:IPR000432
Organism Corchorus olitorius
locus_tag COLO4_34897

Protein

Length 1082aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01022458.1
Definition hypothetical protein COLO4_34897 [Corchorus olitorius]
Locus_tag COLO4_34897

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module M00295        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08737        [VIEW IN KEGG]
EC -
KEGG_Pathway ko01524        [VIEW IN KEGG]
ko03430        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05210        [VIEW IN KEGG]
map01524        [VIEW IN KEGG]
map03430        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05210        [VIEW IN KEGG]
GOs GO:0000217        [VIEW IN EMBL-EBI]
GO:0000404        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0032135        [VIEW IN EMBL-EBI]
GO:0032300        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043570        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGCGCCAAAAATCGATACTGTCGTTCTTGCAAAAACCGGCGAGCCAAAACGGCGCCGGAGGAAAGGTAAAAGGCCAAGGAGATTCTCAGTTTGCTTCAAAGCAACAGGACCAAAATGTGGTCGCTTGCGGCTCATCTGCGGAAGTCACAGGCACCGATACTCCGCCGGAGAAGGTGCCGCGTAAGGTCTTGCCGGCGAGCTTCGCGGCCAATGCCGAGACCAACGGTTCATCTTCTCTGTTTTCTAGTATCATGCATAAGTTTGTGAGGGTAGACAACAAAGAAAATGCAAGTCAGAGGATCCAGGAACGTGATAATTCTCGTAGTGTGAAGGAATTGCCTAAAGTAGGATTAAGTGCTCAACCAACTGAAAATGCCAACGTTTCACTTTCAAATATTGAGAGTGATGACGATCTTGGGCCAGAAACACCTGCTATGAAGCCTGGCGTTTCACGTTTGAAGCGAATTCAAAATGACTTACCTAAGTTTGGGGATAAGAAGGATGGTTCTTTGTTGGAAACTGGTAAACGGGTAAAGCTTGTCCAGGAGTCCACTGTTGTAAACAACAATCTTAGAAATGGCACTGATGTTGCCAGCAAATTTGAATGGCTCAATTCTTCTCACATCAAGGATGCTAATGGAAGAAGACCTGGTGATCCCCTTTATGACAAGAAGACTCTTTATATACCTCCTGATGCTCTGAAGAAAATGTCAGCGTCTCAAAAACAATATTGGAGTGTCAAATGTCAATATATGGATGTTGTGCTCTTCTTTAAAGTGGGGAAGTTCTATGAGCTTTATGAAATAGATGCTGAAATTGGCCACAAGGAACTTGATTGGAAGATAACAATAAGTGGAGTAGGCAAATGCCGCCAGGTTGGCATATCAGAAAGTGGGATTGATGATGCTGTTCAAAAGCTGGTCGCTCGTGGAGAAAGAAATAGAGAGGTGTTGACAATAGAAAGTGCATTAGAGGAAAATGTGAGTACTATATCTGGGCACTCTTTCCTCAGTTTACATATACTGATTCATTTTTTCATGTTCCGAAGATATAAAGTGGGACGTATAGAGCAGCTAGAGACATCTGAGCAAGCAAAAGCAAGGGGTGCAAATTCTGTTATTCAAAGAAAATTAGTTCAAGTAATCACTCCATCAACAACAGTTGATGGTAACATTGGGCCTGATGCTGTTCATCTACTTGCTATAAAGGAGGGAAACTATGGACTGGACAATAGTTCAGCTGTCTATGGGTTTGCTTTTGTTGATTGTGCTGCTTTAAAATTTTGGGTTGGTTCCATCAGTGATGATGCTACTTGTGCTGCTTTGGGAGCTCTATTGATGCAAGTGTCTCCTAAGGAAGTCATATATGACAATAGAGGGCTGTCCAGAGAAGCCCATAAAGCTCTCAAAAAGTACTCATTCACTGGATCTACGGCAGTTCAGCTGAGTCCTGCACTTTCACTGGATGGCGCTGAAGTTAGAAATATGATTCAGTCAAACGGGTACTTTAAGGGGTCACCTAATACATATATTCATGCACTTGATGGCATAATGAATCATGATGTTGCATTGTCTGCACTTGGCGGATTAGTCAGTCATCTATCGCGATTGATGCTTGATGACATTTTACGAAGTGGAGAGATTTTACCCTACCAAGTTTACCAAGGCACCTTGTACAAGTATCTAGATAACTGTCTGACCTCATCTGGTAAGCGACTTTTAAGGAGCTGGATCTGCCATCCACTGAAAGATGTTGACAGCATTAACAACAGGCTAGATGTGGTTGACAAACTGACATCACATTCAGAAATAATGTTACTCATCGCCCAATATCTTCGAAAACTTCCAGATTTAGAAAGGCTTCTCGGACGTGTTAAGGCTAGCAGTCAATCATCAGTTTCGCTTGTTCTTCCCTTGATAGGCAAAAAAGTATTGAAACAACGGGTGAAAGCTTTTGGGACTCTTGTCAAAGGTCTCAGGATTGGAATCGATTTGTTACGATTGTTACAAAATGATGCAGATATGGTATCCGTTTTATTAAAAGTTTTTAAGCTTCCAATGCTTGGTGGTACGAATGGGCTTGATGAATTTCTTACTCAATTTGAAGCAGCCATAGATAGCGACTTCCCAAATTACCAGAAACATGATTTAACAGATACGGATGCTGAAACACTTTCTATACTGATAGAATTATTTATTGAAAAAGCTGCTCAATGGTCTCAAGTCATTCATGCCCTAAACTGCATTGATGTACTAAGATCTTTCGCTGTAAGTGCAAGTTTGTCATCTGGGGCAATGACAAGGCCTCTTGTATTCCCCCAACTAAGTACTGCGACTTTGAACAAAGAAACAGGAGGACCAATACTAAAAATTAAAGGCCTTTGGCATCCATTTGCCCTTGGGGAGAATGGGGGACTGCCTGTTCCAAATGACATTTTCCTGGGTGAGGACTTGAATGACTATCATCCCCGTGCTTTACTACTGACTGGACCAAATATGGGTGGAAAATCGACTCTCTTACGTGCCACTTGTCTGGCTGTTTTACTGGCCCAGCTGGGCTGTTATGTGCCCTGTGAAACATGTGCTATCTCACTTGTGGACATAATCTTTACGAGGCTTGGTGCTACTGATCGAATCATGACTGGGGAGAGCACATTCCTTGTGGAGTGCACTGAAACAGCATCAGTTCTTCAAAATGCTACACAAGATTCTCTTGTTCTTCTTGATGAACTGGGTCGAGGAACAAGCACGTTTGACGGATATGCTATTGCATATGCAGTGTTCCGCCATCTTGTTGAAAAGGTTCATTGTCGGCTATTATTTGCGACGCACTACCATCCCCTTACCAAGGAATTTGCATCTCATCCACACGTTACACTTCAACACATGGCCTGCTCCTTTAAGTCCGAAAGCTGTTCTAAAGGTGAGGAGCTGGTTTTCCTATATCGGCTTACTGATGGAGCATGCCCGGAGAGCTATGGTCTGCAAGTTGCAATTATGGCCGGGATTCCAAAAGATGTAGTTGAAGCTGCCTCACAAGCTGCACAGGTAATGAAAAGATCTGTCGGAAAAAGTTTTAGGTTAAGCGAGCAGAGATCAGAGTTCTCAACTCTTCATGAAGAGTGGTTGAAGACCCTAGTTAACGTCTCCCAGTCACAGGTTGGTAATTCCGATGATGGTGATGTTTATGATACCTTGTTTTGCTTGTGGCATGAACTTAAAAACTGCTATCAAGCCTTAAACTAA
Protein:  
MQRQKSILSFLQKPASQNGAGGKVKGQGDSQFASKQQDQNVVACGSSAEVTGTDTPPEKVPRKVLPASFAANAETNGSSSLFSSIMHKFVRVDNKENASQRIQERDNSRSVKELPKVGLSAQPTENANVSLSNIESDDDLGPETPAMKPGVSRLKRIQNDLPKFGDKKDGSLLETGKRVKLVQESTVVNNNLRNGTDVASKFEWLNSSHIKDANGRRPGDPLYDKKTLYIPPDALKKMSASQKQYWSVKCQYMDVVLFFKVGKFYELYEIDAEIGHKELDWKITISGVGKCRQVGISESGIDDAVQKLVARGERNREVLTIESALEENVSTISGHSFLSLHILIHFFMFRRYKVGRIEQLETSEQAKARGANSVIQRKLVQVITPSTTVDGNIGPDAVHLLAIKEGNYGLDNSSAVYGFAFVDCAALKFWVGSISDDATCAALGALLMQVSPKEVIYDNRGLSREAHKALKKYSFTGSTAVQLSPALSLDGAEVRNMIQSNGYFKGSPNTYIHALDGIMNHDVALSALGGLVSHLSRLMLDDILRSGEILPYQVYQGTLYKYLDNCLTSSGKRLLRSWICHPLKDVDSINNRLDVVDKLTSHSEIMLLIAQYLRKLPDLERLLGRVKASSQSSVSLVLPLIGKKVLKQRVKAFGTLVKGLRIGIDLLRLLQNDADMVSVLLKVFKLPMLGGTNGLDEFLTQFEAAIDSDFPNYQKHDLTDTDAETLSILIELFIEKAAQWSQVIHALNCIDVLRSFAVSASLSSGAMTRPLVFPQLSTATLNKETGGPILKIKGLWHPFALGENGGLPVPNDIFLGEDLNDYHPRALLLTGPNMGGKSTLLRATCLAVLLAQLGCYVPCETCAISLVDIIFTRLGATDRIMTGESTFLVECTETASVLQNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHPLTKEFASHPHVTLQHMACSFKSESCSKGEELVFLYRLTDGACPESYGLQVAIMAGIPKDVVEAASQAAQVMKRSVGKSFRLSEQRSEFSTLHEEWLKTLVNVSQSQVGNSDDGDVYDTLFCLWHELKNCYQALN